Academic Productivity

Springer announced last week the launch of LaTeXSearch.com, a free online service allowing users to search a huge database of LaTeX snippets from Springer journals and publications. This follows the launch of a similar service, a few months ago exposing Springer’s database of scientific images (which suggests a precise strategy on how to build Web services on top of content in their publication database).

LaTeXSearch does what it promises, using similarity algorithms “to normalize and compare LaTeX strings so that, if similar equations are written slightly differently, the outputs are normalized and matched, granting you the broadest possible results set”. The only glitch is that snippets are not cached but generated on the fly, with the annoying result that it can take quite some time to display the rendered version of LaTeX formulas in search results.

Springer launched yesterday a new service allowing users to search, browse, annotate and reuse scientific images from their huge database of publications.

SpringerImages is a growing collection of scientific images that spans the scientific, technical and medical fields, including high-quality clinical images from images.MD. The continually updated collection – currently over 1.5 million images – gathers photos, graphs, histograms, figures, and tables, and is available to libraries and their patrons via a searchable online database. The SpringerImages interface enables users to search faster, more broadly and more accurately, through captions, keywords, context and more, even jumping from the image to the source article. Users can create personalized image “sets,” and can easily export images for use in their own presentations or lectures.

The service offers a range of potentially innovative features.
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Wolfram Alpha, the brainchild of Stephen Wolfram (who allegedly put its company to work on this project for several years before its official launch in May this year), has been out for a while now and is probably no more making the headlines. The long list of examples on the frontpage, organised visually or by topic, proudly shows off what Alpha is capable of. The natural language interface may still be a bit sloppy and some data may be flagrantly missing (how about a dump of the world’s scientific literature, Stephen?), but all in all it manages to live up to the promise of a universal tool to compute an impressive amount of factual knowledge. Alpha allows you, among other things, to:

• plot the sky above your head tonight at 3am
• look up your genome for occurrences of a specific sequence
• compare current unemployment rates for countries you would like to move to
• display the taxonomic tree of your favourite bug
• spell boredom in Morse
• disclose the Answer to Life, the Universe, and Everything
• you can even check your body mass! (am I really 3kg away from my ideal weight?)

Depending on your field of expertise, Alpha is likely to provide a powerful combination of computational tools and relevant data sources to calculate virtually anything you might want to know about the universe.

Apart from technical use, though, I am curious to understand whether and how people will start using Alpha as a productivity tool and integrate it in their daily workflow.
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Frankly, there are too many reference managers today. This  is counterproductive because we all need to spend time checking the newcomers, just in case there’s a new feature that we were missing.

Most reference managers graft themselves to word or to openOffice. For example, Mendeley, and zotero both use internal reference functionality in word. In doing so, they use features that are available only on those editors. I think this is a big error for at least 3 reasons:

1. I draft my papers on a text editor or oneNote. This has a lot of advantages for me. But I would not be able to use say Mendeley or Zotero on oneNote; and I do want to keep references on my notetaking tool. Using a text editor has a lot of nice advantages over a word processor too, if you know how to use it.
2. It’s a lot faster to massage your reference the way you like it. It takes several clicks on zotero to get an Author (year, p. XX) reference. In endNote, it’d be a few keystrokes.
3. There are bottlenecks in our digital lives that are plain text. For example, emails, forum posts, and google docs are cases of writing that may need reference management but are ill-served by most current offerings. I want to copy-paste chunks of scientific writing and still carry my references; there’s life outside word processors, and quite a lot of it!

So what reference managers work ok on plain text. Well, here is the surprise: as far as I know, only bibTeX and endnote. This is surprising because they are the oldest. One would have thought that newcomers would have taken advantage of what these older tools learned.

Lurking in the Zotero forums, I saw people asking for support of this exact feature. But it seems that it’s never going to happen. It would take a lot of reengineering, and all users that are happy with the current solution (and have amassed a large body of authored docs) would complain.

so, where does this leave me? I need to either comply and write everything in word to take advantage of Mendeley and Zotero, or stick to oneNote, but use endNote references. Of course I could also do everything on a text editor and use bibTeX, but right now, it’s more trouble than it’s worth.

Does anyone know a good solution for my setting?

Exciting that an anonymous donor jumped in:

Donate to CHNM in June and your contribution will be matched twice over. Thanks to a challenge grant from the National Endowment for the Humanities, the Center for History and New Media has the rare opportunity to build a $3 million endowment to support infrastructure expenses and ongoing development across its many projects. We’re delighted to announce that now your contribution to the Center for History and New Media will be matched for a limited time. If you give within the month of June your donation will be stretched even further since an anonymous donor has agreed to double the National Endowment for the Humanities matching funds.

If you or your institution used/still pays hundred of dollars per seat on other bibliography manager, consider donations of similar size. If you can raise awareness in your institution, please do so. Zotero is a project that benefits all (Open source) and has been legally attacked (in a childish way) by Thomson before.

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