To RSS subscribers: sorry, last post was not intended for ap.com

The explanation below may only make sense to you if you read this from an RSS reader. If you don’t please skip it.

Have you ever sent an email to the wrong person? Did wish you could pull it back? I just did this, but for our blog (!).

I was feeding a WP install of what will be our company blog, and then I did something nasty…

I was about to post from my desktop tool (word 2010, used to be live writer), and I hit ‘post’ on the wrong doc, and ‘about’ page, ‘google-translated’ from German; prose as horrible as one can get. The blog selected was academicproductivity.com, not our own. I immediately went to the admin page and removed it, so ap.com’s readers won’t see it. But the RSS feed… is another story. For a blog that was dead for a year, we still have >4000 followers. This was the first post to break a long silent stretch. I’d hate if you, the reader, think we resurrected, just to find out a nonsensical blog post.

Since we use feedburner, removing the post locally didn’t help. I had to log in at feedburner, and try to remove it from there. They have a ‘nuke’ option that should force a refresh. But it just didn’t work. I tried a few times, the nonsensical blog post was still there. The only option I could think of was to delete the feed from feedburner, in the hope that they do not broadcast it. But it was too late; all people who subscribe to ap.com’s RSS feed have received the post.

I apologize for kidnapping your attention without a good reason. I’m sorry you got involved in this, but silly mistakes do occur. I will be more careful in the future.

Since the feedburner feed is now gone, if you want to continue receiving updates from ap.com you’d need to resubscribe. Simply click again on the RSS icon on the address bar, and follow the steps there. In any case, we are not dead, and will continue writing for ap.com whenever we find something worth writing about.

When your users tell you ‘you are not adding value’: Boycott against Elsevier

Scott Aaronson uses an analogy to the game industry to describe the predicament academics are in:

I have an ingenious idea for a company. My company will be in the business of selling computer games.

But, unlike other computer game companies, mine will never have to hire a single programmer, game designer, or graphic artist. Instead I’ll simply find people who know how to make games, and ask them to donate their games to me. Naturally, anyone generous enough to donate a game will immediately relinquish all further rights to it. From then on, I alone will be the copyright-holder, distributor, and collector of royalties.

This is not to say, however, that I’ll provide no “value-added.” My company will be the one that packages the games in 25-cent cardboard boxes, then resells the boxes for up to $300 apiece.

But why would developers donate their games to me? Because they’ll need my seal of approval. I’ll convince developers that, if a game isn’t distributed by my company, then the game doesn’t “count”—indeed, barely even exists—and all their labor on it has been in vain.

As crazy as it sounds, this is exactly the situation with academic publishers. The ‘status quo’ is such that young researchers must publish on established journals (to gain the “seal of approval”). For older researchers, switching to open access publishing doesn’t pay off either: it’d show they don’t believe in the value the journals bring, and they are often editors of those (!).

And this is how the current academic publishing industry survives without adding much value. Survival is not the right word, because the leading firms still carry themselves around with arrogance. At the 2010 Semantic Web conference in Shanghai Jay Katzen, a keynote speaker from Elsevier, announced a big project on using the data on papers to create widgets. The API would allow people to do mashups with scientific data, that could be displayed on the publisher’s page. It was sold as “a new paradigm in the way research information is discovered, used, shared and re-used to accelerate science.” The reaction from the audience was instantaneous: “are you telling us that, not happy with monetizing the data and content we freely give you, you want us to build applications using that content for you to sell?”. The answer was honest: “… huh… yes.”

Today, many journal articles are online. In fact, the papers are often on the author’s homepage, and a simple query on google scholar or MS research search will find them. It is hard to imagine what value a publisher adds here.

However, the alternative is not clear. Open access publishing finds it difficult to obtain sustainable sources of financing. PLoS, the Public Library of Science, is financially sustainable, but ArXiv is struggling.

“Now it’s up to the rest of us to supply the anger.” Says Scott. Now more than 800 researchers have declared a boycott against Elsevier, up from 500 yesterday afternoon. Looks like the anger is there.

(An apology for the lack of posting. Dario has moved on to a position as senior researcher at Wikimedia, and I will be working on my startup full-time in a month. Often, I’ve seen blogpost-worthy issues, but I just didn’t have the mental bandwidth to follow up).

Detexify2 – LaTeX symbol classifier

Using HTML5 features, this is the kind of obvious tool that makes symbol lookup faster than doing it by hand.

Just draw the symbol in the box and up comes the LaTeX code, and the package name that contains it.

The Future of the Journal, by Anita de Waard

I just found this presentation, and thought it’s worth bringing it to the attention of ap.com readers:

Anita de Waard is the director of Disruptive Technologies at Elsevier. A company that has a position with such a name has my sympathy. Looks like publishers are slowly realizing that they can have a huge impact on how science is done, and how fast it moves, if they simply paid more attention to modern trends.

Only habit prevents us researchers from realizing that the media we use the most, a paper article with a review cycle of years, is woefully wrong in this day and age.

A somewhat related idea are the 5 stars of open linked data:

★ make your stuff available on the web (whatever format)

★★ make it available as structured data (e.g. excel instead of image scan of a table)

★★★ non-proprietary format (e.g. csv instead of excel)

★★★★ use URLs to identify things, so that people can point at your stuff

★★★★★ link your data to other people’s data to provide context

If scientists and publishers have opendata in mind (and the trend is there!) doing research becomes more fun immediately (no more mails to the authors asking for data that get no response). Seeing that the academic publishing industry has at least one person (Anita) that gets it makes me feel good. Looks like Elsevier has a head-start.

SciSurfer: real-time search on journal articles

Imagine a world where real-time search is the norm. You will get just the information you seek landing on your lap the exact minute it becomes available, without you having to explicitly search for it. Will this change the way you do science? SciSurfer thinks it will.

The release cycle of scientific knowledge is slow. It may take up to 2 years for a paper to get accepted in a journal. The publishing process in itself will add a buffer of a few months (arguably because of the time cost of having a paper edition, even though most people will never use it). So, for some of us, it doesn’t feel like we are missing much if we do not get the latest updates on our field the very same minute they are published. Just going to conferences yearly feels like more than enough. But there is a portion of the academia that needs constant updates on their field, as close to real-time as possible. If you are in the life sciences, getting the latest paper about a molecule or a gene you work on before your competitor does may make or break your career.

For those academics, sciSurfer may be a very valuable tool. The basic idea of sciSurfer is to integrate all journal feeds and search over them. Note that they do not archive RSS, so only the latest articles are available. This is a different way to think about search, closer to twitter’s than to Google’s.

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