Archive for category: e-Science

LaTeXSearch: 1M snippets in a searchable database

January 24th, 2010 by dario

Springer announced last week the launch of LaTeXSearch.com, a free online service allowing users to search a huge database of LaTeX snippets from Springer journals and publications. This follows the launch of a similar service, a few months ago exposing Springer’s database of scientific images (which suggests a precise strategy on how to build Web services on top of content in their publication database).

LaTeXSearch does what it promises, using similarity algorithms “to normalize and compare LaTeX strings so that, if similar equations are written slightly differently, the outputs are normalized and matched, granting you the broadest possible results set”. The only glitch is that snippets are not cached but generated on the fly, with the annoying result that it can take quite some time to display the rendered version of LaTeX formulas in search results.

The Changing Dynamics of Scientific Collaborations

November 13th, 2009 by dario

Call for participation for a workshop at CSCW 2010
[submission deadline: November 20, 2009]

cscw 2010The confluence of two major trends in scientific research is leading to an upheaval in standard scientific practice and collaborative technologies. A new generation of scientists, working in large-scale collaborations, is repurposing social software for use in collaborative science. Existing social tools such as chat, IM, and FriendFind are being adopted and modified for use as group problem-solving facilities. At the same time, exponentially greater and more complex datasets are being generated at a rate that is challenging the limits of current hardware, software, and human cognitive capability. A concerted effort to create software that will support new scientific practices and handle this data tsunami is redefining the collaboratory and represents a new frontier for computer supported cooperative work.

This follow-on event to a similarly themed workshop at CHI 2009 is intended to foster community among researchers and practitioners from multiple disciplines interested in the changing dynamics of scientific collaborations.
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Technology and collaboration: A survey

November 5th, 2009 by dario

collabMy colleague Alastair is conducting a survey about online academic collaboration, use of tools and attitudes to technology in the Academia as part of the Qlectives project. All participants who supply an email address (and complete the questionnaire by the 14 November) will be entered into a prize draw.
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Who does Google think you are?

September 16th, 2009 by james

One of the themes we’ve been discussing here is the idea that prestige and attention are the main currencies of academia. So it only makes sense that you want your online presence to be an accessible and positive reflection of your work and, at the very least, you want to be distinguishable from all of the other John Smiths in the world.

MIT has recently put together a tool called Personas which attempts to figure out this question of online identity. I say attempts because to be honest, it’s a bit hit and miss. The design looks pretty good but the results seem to change each time you run it, you can’t review the underlying data and it doesn’t even have a roll-over to quantify each chunk of your profile (e.g. percent of total, source documents etc).

Personas profile
[click for bigger]

It’s a noble effort though and it got me thinking that there are two sides to the question of online identity. (more…)

Nascent: Igor – a Google Wave robot to manage your references

August 20th, 2009 by jose

Looks like the Connotea team is on the right track. Instead of trying to bolt something to insert references into word, they are trying to go straight to wave.

We have blogged before about what a good integration between references and writing tools should look like, and quite honestly, Igor looks like it’s really getting it in terms of agility. You can specify a few terms and it disambiguates that into the reference you need. Looks smarter than the approach that endnote/bibTeX/zotero/Mendeley use. It only works for the online reference managers citeUlike and Connotea, though.

I’m not sure the references are portable, i.e., if I copy/paste a chunk of text with references, they come along to wherever I paste it to (it must be another wave, in this case). Endnote/bibTeX get this right, although they depend on a local file that you would have to send along.

As things stand, I think wave has a very good chance of becoming _the_ platform for collaborative scientific writing. You may have to convince your collaborators to try it (and some must have been put off by Google Docs, which is clearly not ready for science), but it could be very motivating to see their writing grow next to yours in real time.

Since wave is a lot more open than Google Docs it would not surprise me to see robots coming up to mend the deficiencies that make Docs unfit for papers: no tables, crossrefs, footnotes, equations, etc. Wave gives you versioning for free, which was another pain point of scientific collaboration.

Igor – a Google Wave robot to manage your references from Stew Fnl on Vimeo.